Svejstrup, J.Q. (2002). Chromatin elongation factors. Curr. Opin. Genet. Dev. 12, 156-161.

Svetlov, V.V., and Cooper, T.G. (1995). Review: .compilation and characterization of dedicated transcription factors in Saccharomyces cerevisiae. Yeast 11, 1439-1484.

Takagi, Y., Conaway, J.W., and Conaway, R.C. (1995). A novel activity associated with RNA polymerase II elongation factor

Sill. SIII directs promoter-independent transcription initiation by RNA polymerase II in the absence of initiation factors. J. Biol. Chem. 270, 24300-24305.

Takagi, Y., Conaway, J.W., and Conaway, R.C. (1996). Characterization of elongin C functional domains required for interaction with elongin B and activation of elongin A. J. Biol. Chem. 271, 25562-25568.

Tan, S., Aso, T„ Conaway, R.C., and Conaway, J.W. (1994). Roles for both the RAP30 and RAP74 subunits of transcription factor IIF in transcription initiation and elongation by RNA polymerase II. J. Biol. Chem. 269, 25684-25691. Tantin D., Kansal, A., and Carey, M. (1997). Recruitment of the putative transcription-repair coupling factor CSB/ERCC6 to RNA polymerase II elongation complexes. Mol. Cell. Biol. 17, 6803-6814.

Thirman, M.J., Levitan, D.A., Kobayashi, H., Simon, M.C., and Rowley, J.D. (1994). Cloning of ELL, a gene that fuses to MLL in a t(lI;19)(q23;pl3.1) in acute myeloid leukemia. Proc. Natl. Acad. Sci.USA 91, 12110-12114.

Thompson, C.M., Koleske, A.J., Chao, D.M., and Young, R.A. (1993). A multisubunit complex associated wit the RNA polymerase II CTD and TATA-bnding protein in yeast. Cell 73, 1361-1375.

Thompson, C.M., and Young, R.A. (1995). General requirement for RNA polymerase II holoenzymes in vivo. Proc. Natl. Acad. Sci. USA 92, 4587-4590.

Tran, H.G., Steger, D.J., Iyer, V.R., and Johnson, A.D. (2000). The chromo domain protein Chdlp from budding yeast is an ATP-dependent chromatin-modifying factor. EMBO J. 29, 2323-2331.

Treich, I., Cairns, B.R., de los Santos, T., Brewster, E., and Carlson, M. (1995). SNF11, a new component of the yeast SNF-SWI complex that interacts with a conserved region of SNF2. Mol. Cell. Biol. 15, 5240-4248.

Tsukiyama, T., Palmer, J., Landel, C.C., Shiloach, J., and Wu, C. (1999). Characterization of the imitation switch subfamily of ATP—dependent chromatin-remodeling factors in Saccharomyces cerevisiae. Genes Dev. 13, 686-697.

Verrijzer, C.P., and Tjian, R. (1996). TAFs mediate transcriptional activation and promoter selectivity. TIBS 21, 338-341. Wada, T., Takagi, T., Yamaguchi, Y., Ferdous, A., Imai, T., Hirose, S., Sugimoto, S., Yano, K., Hartzog, G.A., Winston, F., Buratowski, S., and Handa, H. (1998). DSIF, a novel transcription elongation factor that regulates RNA polymerase II processivity, is composed of human Spt4 and Spt5 homologs. Genes Dev. 12, 343-356.

Wade, P.A., and Jaehning, J. A. (1996). Transcriptional corepression in vitro: a Motlp-associated form of TATA-binding protein is required for repression by Leu3p. Mol. Cell. Biol. 16, 1641-1648.

Wade, P.A., Werel, W., Fentzke, R.C., Thompson, N.E., Leykam, J.F., Burgess, R.R., Jaehning, J.A., and Burton, Z.F. (1996). A

novel collection of accessory factors associated with yeast RNA polymerase II. Protein Expr. Purif. 8, 85-90. Watanabe, T., Hayashi, K., Tanaka, A., Furumoto, T., Hanaoka, F., and Ohkuma, Y. (2003). The carboxy terminus of the small subunit of TFIIE regulates the transition from transcription initiation to elongation by RNA polymerase II. Mol. Cell. Biol. 23, 2914-2926.

Wilson, C.J., Chao, D.M., Imbalzano, A.N., Schnitzler, G.R., Kingston, R.E., and Young, R.A. (1996). RNA polymerase II holoenzyme contains SWI/SNF regulators involved in chromatin remodeling. Cell 84, 235-244.

Wind, M., and Reines, D. (2000). Transcription elongation factor SII. BioEssays 22, 327-336.

Wind-Rotolo, M., and Reines, D. (2001). Analysis of gene induction and arrest site transcription in yeast with mutations in the transcription elongation machinery. J. Biol. Chem. 276, 11531-11538.

Winkler, S.G., Petrakis, T.G., Ethelberg, S., Tokunaga, M., Erdjument-Bromage, H., Tempst, P., and Svejstrup J.Q. (2001). RNA polymerase II Elongator holoenzyme is composed of two discrete subcomplexes. J. Biol. Chem. 276, 32743-32749. Winston, F., and Carlson, M. (1992). Yeast SNF/SWI transcriptional activators and the SPT/SIN chromatin connection. Trends Genet. 8, 387-391.

Wittschieben, B.O., Otero, G., de Bizemont, T., Fellows, J., Erdjument-Bromage, H., Ohba, Y., Li, Y., Allis, C.D., Tempst, P., and Svejstrup, J.Q. (1999). A novel histone actyltransferase is an integral subunit of elongating RNA polymerase II holoenzyme. Mol. Cell 4, 123-128.

Wittschieben, B.O., Fellows, J., Du, W., Stillman, D.J., and Svejstrup, J.Q. (2000). Overlapping roles for the histone actyltransferase activities of SAGA and Elongator in vivo. EMBO J. 19, 3060-3068.

Wu, C.H., Yamaguchi, Y., Benjamin, L.R., Horvat-Gordan, M., Washinsky, J., Enerly, E., Larsson, J., Lambertsson, A., Handa, H., and Gilmour, D. (2003). NELF and DSIF cause promoter proximal pausing on the hsp70 promoter in Drosophila. Genes Dev. 17, 1402-1414.

Yamaguchi, Y., Takagi, T., Wada, T., Yano, K., Furuya, A., Sugimot, S., Hasegawa, J., and Handa, H. (1999). NELF, a multisubunit complex containing RD, cooperates with DSIF to repress RNA polymerase II elongation. Cell 97, 41-51. Yamaguchi, Y., Inukai, N., Narita, T., Wada, T., and Handa, H. (2002). Evidence that negative elongation factor represses transcription elongation through binding to a DRB sensitivity-inducing factor/RNA polymerase II complex and RNA. Mol. Cell. Biol. 22, 2918-2927.

Yamamato, S., Watanabe, P.J., van der Speck, P.J., Watanabe, T., Fujimoto, H., Hanaoaka, F., and Ohkuma, Y. (2001). Studies of nematode TFIIE function reveal a link between Ser-5 phosphorylation of RNA polymerse II and the transition from transcription initiation to elongation. Mol. Cell. Biol. 21, 1-15.

Yan, Q., Moreland, R.J., Conaway, J.W., and Conaway, R.C. (1999). Dual roles for transcription factor IIF in promoter escape by RNA polymerase II. J. Biol. Chem. 274, 35668-35675. Yue, Z., Maldonado, E., Pillutla, R., Cho, H„ Reinberg, D„ and Shatkin A.J. (1997). Mammalian capping enzyme complements mutant Saccharomyces cerevisiae lacking mRNA guanylyltransferase and selectively binds the elongating form of RNA polymerase II. Proc. Natl. Acad, Sei. USA 94, 12898-12903.

Zawel, L., and Reinberg, D. (1993). Initiation if transcription by RNA polymerase II: a multistep process. Prog. Nucleic Acid Res. Mol. Bio.l. 44, 67-108.

Zawel, L., Kumar, K.P., and Reinberg, D. (1995). Recycling of the general transcription factors during RNA polymeradse II transcription. Genes Dev. 9, 1479-1490.

Zhao, J., Hymann, L., and Moore, C. (1999). Formation of mRNA 3' ends in eukaryotes: mechanism, regulation and interrelationships with other steps in mRNA synthesis. Microbiol. Mol. Biol. Rev. 63, 405-445.

Zhou, Q., Lieberman, P.M., Boyer, T G., and Berk, A.J. (1992). Holo-TFIID supports transcriptional stimulation by diverse activators and from a TATA-less promoter. Genes Dev. 6, 1964-1974.

Zhu, Y., Peterson, C.L., and Christman, M.F. (1995). HPR1 encodes a global positive regulator of transcription in Saccharomyces cerevisiae. Mol. Cell. Biol. 15, 1698-1708. Zorio, D.A.R., and Bentley, D.L. (2004). The link between mRNA processing and transcription: communication works both ways. Exper. Cell Res. 296, 91-97.

0 0

Post a comment